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Jenkins CI as a Scientific Data and Image Processing Platform

Ioannis Moutsatsos(44:02) Binoculars Image 1970 views

sourced from BioUno

Jenkins CI provides a robust framework for the integration and standardization of scientific workflows. We use Jenkins CI in combination with CellProfiler, an open source image processing software, to build an integrated platform for processing microscopy images and associated data generated from high content screening (HCS). The platform enables scientists to easily access required high performance computing resources, collaborate with each other and easily track data and meta to enhance reproducible research.